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Model repository

Models

+ Miyoshi et al. 2007
+ Plyusnina et al. (in prep.)
+ Hertel et al. 2013
+ Jablonsky et al. 2014
+ Clark et al. 2014 (in progress)
+ Fridlyand et al. 1995
o Grimaud et al. 2014
o E-cyano team 2017, clock & C-N metabolism
o Müller et al. 2019

Matrix analysis of Jablonsky et al. 2014

Below are listed set of mass conservations in selected model. You can view conserved entities by clicking on listed items.

Data from mass conservation analysis could be downloaded in SBRML format clicking on corresponding text underneath.


Mass
List of Matrix:

+1# Total amount: 2.5293e+23
Components:
NADPH
NADPp
+2# Total amount: 9.03321e+23
Components:
ADP
ATP

Analysis data:     SBRML
Please use the following reference to cite this web site:
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI