Models
Stoichiometry matrix of Clark et al. 2014 (in progress)
This page displays stoichiometry matrix of selected model
Entities are in rows, rules in columns
You can also download SBRML file clicking on link below.
| (HCO3 Membrane Transport) | (CO2 Fixation) | (CO2 Hydration cyt) | (HCO3 Dehydration cyt) | (CO2 Hydration carb) | (HCO3 Dehydration carb) | (CO2 membrane transport in) | (HCO3 carboxysome transport in) | |
| HCO3_cyt | 1 | 0 | 1 | -1 | 0 | 0 | 0 | -1 |
| CO2_carb | 0 | -1 | 0 | 0 | -1 | 1 | 0 | 0 |
| CO2_cyt | 0 | 0 | -1 | 1 | 0 | 0 | 1 | 0 |
| HCO3_carb | 0 | 0 | 0 | 0 | 1 | -1 | 0 | 1 |
Analysis data: SBRML
Please use the following reference to cite this web site:
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI