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Biochemical Space

Below is displayed the reaction view of the selected reaction. Reaction view is shown in the form of scheme showing corresponding substrates(blue) and products(red). The navigation panel on the left shows the reaction in corresponding model and allows you to browse the biological structure of the model. Manipulation with the navigation panel is realized by unfolding the items in the navigation tree and clicking on a requested system level.

Annotations Tab
All the annotation links to relevant databases for the currently selected reaction are displayed on the Annotation Tab below the scheme.

Entities Tab
Entities Tab contains information about entities which figures in selected reaction. There are two types of entities in reaction – substrates and products.

Visualised in
This tab contains set of processes in which selected entity is present.

oxidation of Qa{-} and reduction of Qb{-} in PSII RC

the electron from the reduced primary quinone acceptor of PSII Qa-
ps2(qa{-}|qb{-})::tlm <=> ps2(qa{n}|qb{2-})::tlm



Please use the following reference to cite this web site:
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI