E-cyanobacterium Team

Contact

Systems Biology Laboratory

Faculty of Informatics
Masaryk University Brno
Czech Republic

In case of any questions, please do not hesitate to contact us.

Staff   

Active developers: Jakub Hrabec, David Šafránek, Matej Troják, Jakub Šalagovič, Matej Hajnal, and Lukrécia Mertová
Local collaborators:  Jan Červený
External collaborators:  Stefan Mueller, Ralf Steuer, Stefanie Hertel, Jiří Jablonský, Henning Knoop, Ladislav Nedbal, and Dušan Lazár
Former collaborators: Tadeáš Děd, Zdeněk Beneš, Lukáš Hájek, Aleš Pejznoch, Petr Horáček, Františka Romanovská, and Matej Klement

Publications

To cite this site use

M. Troják, D. Šafránek, J. Hrabec, J. Šalagovič, F. Romanovská, J. Červený: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI

Related publications

T. Děd, D. Šafránek, M. Troják, M. Klement, J. Šalagovič, L. Brim: Formal Biochemical Space with Semantics in Kappa and BNGL. In Static Analysis and Systems Biology, volume 326 of Electronic Notes in Theoretical Computer Science, pages 27–49. ELSEVIER, 2016. (SASB 2015). DOI

M. Klement, T. Děd, D. Šafránek: Biochemical Space: A Framework for Systemic Annotation of Biological Models. In Electronic Notes in Theoretical Computer Science, 306:31–44, 2014. DOI​​​​​​​

Funding

The experimental platform supplying data for this website has been partially supported by the Czech research infrastructure for systems biology C4SYS (project no LM2015055).

The platform development was partially supported by the activities of EC OP project financed from EU with the support of MEYS CR: Local Team and International Consortium for Computational Modelling of a Cyanobacterial Cell, Reg. No. CZ.1.07/2.3.00/20.0256)

Related

http://www.e-photosynthesis.org/