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E-cyanobacterium Team

Contact

Systems Biology Laboratory

Faculty of Informatics
Masaryk University Brno
Czech Republic

In case of any questions, please do not hesitate to contact us.

Staff   

Active developers: Jakub Hrabec, David Šafránek, Matej Troják, Jakub Šalagovič, Františka Romanovská, Matej Klement
Local collaborators:  Jan Červený
External collaborators:  Stefan Mueller, Ralf Steuer, Stefanie Hertel, Jiří Jablonský, Henning Knoop, Ladislav Nedbal, Dušan Lazár
Former collaborators: Tadeáš Děd, Zdeněk Beneš, Lukáš Hájek, Aleš Pejznoch, Petr Horáček

Publications

To cite this site use

M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI

Related publications

T. Ded, D. Safranek, M. Trojak, M. Klement, J. Salagovic, L. Brim: Formal Biochemical Space with Semantics in Kappa and BNGL. In Static Analysis and Systems Biology, volume 326 of Electronic Notes in Theoretical Computer Science, pages 27–49. ELSEVIER, 2016. (SASB 2015). DOI

M. Klement,T. Ded, D. Safranek: Biochemical Space: A Framework for Systemic Annotation of Biological Models. In Electronic Notes in Theoretical Computer Science, 306:31–44, 2014. DOI​​​​​​​

Funding

The experimental platform supplying data for this website has been partially supported by the Czech research infrastructure for systems biology C4SYS (project no LM2015055).

The platform development was partially supported within the activities of EC OP project financed from EU with the support of MEYS CR: Local Team and International Consortium for Computational Modelling of a Cyanobacterial Cell, Reg. No. CZ.1.07/2.3.00/20.0256)

Related

http://www.e-photosynthesis.org/


Please use the following reference to cite this web site:
M. Trojak, D. Safranek, J. Hrabec, J. Salagovic, F. Romanovska, J. Cerveny: E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria. In: Computational Methods in Systems Biology, CMSB 2016, Vol. 9859 of LNCS, pp. 316-322. Springer, 2016. DOI